what i mean is to to use iso-8859-1 , iso-8859-2 ....etc
here is what I need to see from your phpmyadmin (this is my settings)
and here is what my setting
so you said on your PMA (phpmyadmin) shows as Latin1_swedish_ci right?
so in your tracker it should say iso-8859-1 according to this
iso-8859-1 article if your PMA says something else other than latin1 then check other ones